| 1 | Nikolai Komlichenko
FK Mladá Boleslav | FK Mladá Boleslav | 32 | 29 |
| 2 | Jean-David Beauguel
Viktoria Plzen | Viktoria Plzen | 13 | 15 |
| - | Martin Doležal
FK Jablonec | FK Jablonec | 29 | 15 |
| 4 | Tomáš Wágner
MFK Karviná | MFK Karviná | 29 | 13 |
| - | Tomáš Soucek
Slavia Prague | Slavia Prague | 34 | 13 |
| 6 | Guélor Kanga
Sparta Prague | Sparta Prague | 24 | 12 |
| - | Miroslav Stoch
Slavia Prague | Slavia Prague | 33 | 12 |
| 8 | Benjamin Tetteh
Sparta Prague | Sparta Prague | 32 | 11 |
| - | Jakub Hora
FK Teplice | FK Teplice | 31 | 11 |
| 10 | Jan Matoušek
FK Jablonec | FK Jablonec | 0 | 10 |
| - | Michal Trávník
FK Jablonec | FK Jablonec | 33 | 10 |
| 12 | Tomas Poznar
FC Trinity Zlín | FC Trinity Zlín | 22 | 9 |
| - | Tomas Smola
Baník Ostrava | Baník Ostrava | 0 | 9 |
| - | Lukas Budinsky
MFK Karviná | MFK Karviná | 31 | 9 |
| - | Nemanja Kuzmanovic
Baník Ostrava | Baník Ostrava | 17 | 9 |
| - | Tomas Prikryl
FK Mladá Boleslav | FK Mladá Boleslav | 33 | 9 |
| - | Josef Hušbauer
Slavia Prague | Slavia Prague | 33 | 9 |
| 18 | Martin Nešpor
Sigma Olomouc | Sigma Olomouc | 26 | 8 |
| - | Lukáš Masopust
Slavia Prague | Slavia Prague | 12 | 8 |
| - | Dame Diop
Baník Ostrava | Baník Ostrava | 28 | 8 |
| 21 | Michael Krmencík
Viktoria Plzen | Viktoria Plzen | 13 | 7 |
| - | Libor Kozák
Slovan Liberec | Slovan Liberec | 14 | 7 |
| - | Jan Kuchta
FK Teplice | FK Teplice | 8 | 7 |
| - | David Vanecek
FK Teplice | FK Teplice | 16 | 7 |
| - | Milan Škoda
Slavia Prague | Slavia Prague | 28 | 7 |
| - | David Guba
MFK Karviná | MFK Karviná | 29 | 7 |
| - | Roman Procházka
Viktoria Plzen | Viktoria Plzen | 23 | 7 |
| - | Antonín Fantiš
1.FK Pribram | 1.FK Pribram | 31 | 7 |
| - | Vlastimil Danicek
1.FC Slovácko | 1.FC Slovácko | 34 | 7 |
| 30 | Uros Djuranovic
FK Dukla Praha | FK Dukla Praha | 29 | 6 |
| - | Tomáš Chorý
Viktoria Plzen | Viktoria Plzen | 26 | 6 |
| - | Milan Baroš
Baník Ostrava | Baník Ostrava | 17 | 6 |
| - | Peter Olayinka
Slavia Prague | Slavia Prague | 24 | 6 |
| - | Tomas Zajic
1.FC Slovácko | 1.FC Slovácko | 26 | 6 |
| - | Ladislav Takacs
FK Mladá Boleslav | FK Mladá Boleslav | 32 | 6 |
| - | Roman Potocný
Slovan Liberec | Slovan Liberec | 32 | 6 |
| - | Tomáš Holeš
FK Jablonec | FK Jablonec | 35 | 6 |
| 38 | Pavel Vyhnal
FC Trinity Zlín | FC Trinity Zlín | 17 | 5 |
| - | Jan Chramosta
FK Jablonec | FK Jablonec | 24 | 5 |
| - | Muris Mesanovic
FK Mladá Boleslav | FK Mladá Boleslav | 11 | 5 |
| - | Abdulla Yusuf Helal
Bohemians 1905 | Bohemians 1905 | 24 | 5 |
| - | Lukáš Sadílek
1.FC Slovácko | 1.FC Slovácko | 24 | 5 |
| - | Jan Kovarík
Viktoria Plzen | Viktoria Plzen | 26 | 5 |
| - | Jan Kopic
Viktoria Plzen | Viktoria Plzen | 23 | 5 |
| - | Tomáš Ladra
FK Mladá Boleslav | FK Mladá Boleslav | 30 | 5 |
| - | Jakub Plsek
Sigma Olomouc | Sigma Olomouc | 30 | 5 |
| - | Patrik Hrošovský
Viktoria Plzen | Viktoria Plzen | 35 | 5 |
| 48 | Miroslav Slepicka
1.FK Pribram | 1.FK Pribram | 9 | 4 |
| - | Vaclav Jurena
SFC Opava | SFC Opava | 29 | 4 |
| - | Jakub Necas
Bohemians 1905 | Bohemians 1905 | 19 | 4 |